Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CDQ20250.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
arnB_1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase.
  
 
  0.813
rfbB
dTDP-glucose 4,6-dehydratase.
  
    0.788
arnF
Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF.
       0.786
arnC
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
       0.783
rmlA
Glucose-1-phosphate thymidylyltransferase.
  
    0.783
CDQ20247.1
Hypothetical protein.
       0.770
gltB_1
Ferredoxin-dependent glutamate synthase 1.
   
 
 0.651
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.572
aroK
Shikimate kinase.
    
  0.517
aroF_1
Phospho-2-dehydro-3-deoxyheptonate aldolase.
    
  0.505
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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