STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ20320.1Hypothetical protein. (610 aa)    
Predicted Functional Partners:
CDQ20316.1
Conjugal transfer ATP-binding protein TraC.
       0.701
CDQ20321.1
Type IV secretion system protein VirD4.
       0.696
CDQ20317.1
Hypothetical protein.
       0.679
CDQ20315.1
Hypothetical protein.
       0.661
CDQ20318.1
Hypothetical protein.
       0.661
CDQ20319.1
Hypothetical protein.
       0.661
CDQ20322.1
Hypothetical protein.
       0.637
CDQ20323.1
Hypothetical protein.
       0.616
CDQ20324.1
Hypothetical protein.
       0.592
CDQ18515.1
NAD(P)H dehydrogenase (quinone).
   
    0.522
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.