STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcTRNA-binding antitermination protein GlcT. (280 aa)    
Predicted Functional Partners:
ptsG_1
EIICBA-Glc.
 
 0.987
sacX
PTS system sac EIIBC component.
 0.954
treB
EIIBC-Tre.
 0.952
fruA_1
EIIABC-Fru.
 
 
 0.946
crr_2
Glucose-specific phosphotransferase enzyme IIA component.
 
 
 0.849
ptsG_2
EIICBA-Glc.
 
 
 0.839
crr_1
Glucose-specific phosphotransferase enzyme IIA component.
 
 
 0.833
mtlR_2
Mannitol operon transcriptional activator.
 
 
 0.705
mtlA
EIICBA-Mtl.
 
 
 0.629
mtlR_1
Mannitol operon transcriptional activator.
 
 
 0.608
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.