STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC_1Putative aliphatic sulfonates transport permease protein SsuC. (252 aa)    
Predicted Functional Partners:
cmpC
Bicarbonate transport ATP-binding protein CmpC.
 
 0.991
ssuA_1
Putative aliphatic sulfonates-binding protein precursor.
 
 0.989
cmpD
Bicarbonate transport ATP-binding protein CmpD.
 
 0.964
ssuA_2
Putative aliphatic sulfonates-binding protein precursor.
 
 
 0.921
glnQ_4
Glutamine transport ATP-binding protein GlnQ.
 
 
 0.828
CDQ20394.1
Hypothetical protein.
       0.509
azr
FMN-dependent NADPH-azoreductase.
  
 
  0.503
nasC
Assimilatory nitrate reductase catalytic subunit.
 
  
 0.461
CDQ21540.1
NAD(P)H-dependent FAD/FMN reductase.
  
 
  0.437
luxA_1
Alkanal monooxygenase alpha chain.
  
 
 0.436
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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