STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tcyA_1L-cystine-binding protein TcyA precursor; Belongs to the bacterial solute-binding protein 3 family. (295 aa)    
Predicted Functional Partners:
yecS_2
Inner membrane amino-acid ABC transporter permease protein YecS; Belongs to the binding-protein-dependent transport system permease family.
 0.998
tcyB
L-cystine transport system permease protein TcyB.
 0.997
glnP
Glutamine transport system permease protein GlnP.
 0.991
yecS_1
Inner membrane amino-acid ABC transporter permease protein YecS.
 0.989
tcyC
L-cystine import ATP-binding protein TcyC.
 
 0.960
glnQ_3
Glutamine transport ATP-binding protein GlnQ.
 
 0.940
glnQ_2
Glutamine transport ATP-binding protein GlnQ.
 
 0.939
tcyA_2
L-cystine-binding protein TcyA precursor; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.902
cheV
Chemotaxis protein CheV.
   
 0.770
fliY
Sulfate starvation-induced protein 7; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.768
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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