STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phnE_1Phosphate-import permease protein PhnE. (285 aa)    
Predicted Functional Partners:
phnD
Phosphate-import protein PhnD precursor.
 
 
 0.992
glnQ_4
Glutamine transport ATP-binding protein GlnQ.
 
  
  0.991
phnL
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL.
 
 
 0.979
phnE_2
Phosphate-import permease protein PhnE.
 
  
 
0.978
phnM
Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase.
 
 
 0.907
phnI
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI.
 
  
 0.891
phnH
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH.
 
  
 0.891
phnK
Putative phosphonates utilization ATP-binding protein PhnK.
 
  
 0.890
phnJ
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase.
 
  
 0.880
CDQ20822.1
Phosphonate C-P lyase system protein PhnG.
 
  
 0.877
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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