STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDQ20855.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
CDQ20857.1
Hypothetical protein.
   
   0.969
CDQ20854.1
Phage major tail protein, TP901-1 family.
   
   0.968
CDQ20858.1
Phage gp6-like head-tail connector protein.
   
   0.950
CDQ20856.1
Phage protein, HK97 gp10 family.
       0.804
CDQ20859.1
Hypothetical protein.
       0.773
CDQ20860.1
Hypothetical protein.
       0.756
CDQ20853.1
Phage protein.
       0.628
CDQ20852.1
Hypothetical protein.
       0.517
CDQ20851.1
Phage-related protein.
       0.481
CDQ20850.1
Hypothetical protein; Putative phage tail component, N-terminal domain.
       0.470
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.