Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ18372.1 | btrK | BN982_00639 | BN982_03272 | Hypothetical protein. | L-glutamyl-[BtrI acyl-carrier protein] decarboxylase. | 0.411 |
CDQ18372.1 | iucA_2 | BN982_00639 | BN982_03273 | Hypothetical protein. | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase. | 0.703 |
CDQ18372.1 | iucC_2 | BN982_00639 | BN982_03274 | Hypothetical protein. | Aerobactin synthase. | 0.628 |
btrK | CDQ18372.1 | BN982_03272 | BN982_00639 | L-glutamyl-[BtrI acyl-carrier protein] decarboxylase. | Hypothetical protein. | 0.411 |
btrK | iucA_2 | BN982_03272 | BN982_03273 | L-glutamyl-[BtrI acyl-carrier protein] decarboxylase. | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase. | 0.907 |
btrK | iucC_1 | BN982_03272 | BN982_02522 | L-glutamyl-[BtrI acyl-carrier protein] decarboxylase. | Aerobactin synthase. | 0.552 |
btrK | iucC_2 | BN982_03272 | BN982_03274 | L-glutamyl-[BtrI acyl-carrier protein] decarboxylase. | Aerobactin synthase. | 0.860 |
ddc | iucA_2 | BN982_02526 | BN982_03273 | L-2,4-diaminobutyrate decarboxylase. | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase. | 0.657 |
ddc | iucB | BN982_02526 | BN982_02524 | L-2,4-diaminobutyrate decarboxylase. | N(6)-hydroxylysine O-acetyltransferase. | 0.954 |
ddc | iucC_1 | BN982_02526 | BN982_02522 | L-2,4-diaminobutyrate decarboxylase. | Aerobactin synthase. | 0.942 |
ddc | iucC_2 | BN982_02526 | BN982_03274 | L-2,4-diaminobutyrate decarboxylase. | Aerobactin synthase. | 0.772 |
ddc | iucD_1 | BN982_02526 | BN982_00632 | L-2,4-diaminobutyrate decarboxylase. | L-lysine N6-monooxygenase. | 0.832 |
ddc | iucD_2 | BN982_02526 | BN982_00911 | L-2,4-diaminobutyrate decarboxylase. | L-lysine N6-monooxygenase. | 0.836 |
ddc | iucD_3 | BN982_02526 | BN982_02523 | L-2,4-diaminobutyrate decarboxylase. | L-lysine N6-monooxygenase. | 0.961 |
ddc | mbtK | BN982_02526 | BN982_00411 | L-2,4-diaminobutyrate decarboxylase. | Lysine N-acyltransferase MbtK. | 0.809 |
iucA_2 | CDQ18372.1 | BN982_03273 | BN982_00639 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase. | Hypothetical protein. | 0.703 |
iucA_2 | btrK | BN982_03273 | BN982_03272 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase. | L-glutamyl-[BtrI acyl-carrier protein] decarboxylase. | 0.907 |
iucA_2 | ddc | BN982_03273 | BN982_02526 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase. | L-2,4-diaminobutyrate decarboxylase. | 0.657 |
iucA_2 | iucB | BN982_03273 | BN982_02524 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase. | N(6)-hydroxylysine O-acetyltransferase. | 0.776 |
iucA_2 | iucC_1 | BN982_03273 | BN982_02522 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase. | Aerobactin synthase. | 0.559 |
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