STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ20980.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
CDQ20979.1
Hypothetical protein.
       0.773
CDQ20981.1
Hypothetical protein.
       0.773
CDQ20982.1
Hypothetical protein.
       0.773
CDQ20983.1
Hypothetical protein.
       0.584
CDQ20984.1
Hypothetical protein.
       0.579
CDQ20985.1
Hypothetical protein.
       0.579
CDQ20986.1
Hypothetical protein.
       0.426
CDQ20987.1
Hypothetical protein.
       0.426
CDQ20988.1
Hypothetical protein; Phage/plasmid primase, P4 family, C-terminal domain.
       0.426
CDQ20989.1
Hypothetical protein; Bifunctional DNA primase/polymerase, N-terminal.
       0.426
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.