STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDQ20996.1Enterobactin/ferric enterobactin esterase. (242 aa)    
Predicted Functional Partners:
CDQ20997.1
2'-5' RNA ligase; Belongs to the 2H phosphoesterase superfamily. YjcG family.
 
  
 0.971
yjcF
Putative N-acetyltransferase YjcF.
  
    0.831
cvfC_2
Hypothetical protein; Conserved virulence factor C.
  
  
  0.655
CDQ19574.1
Hypothetical protein.
  
     0.651
CDQ21122.1
Hypothetical protein.
  
     0.627
CDQ21384.1
Hypothetical protein.
  
     0.581
CDQ20549.1
Beta-hexosaminidase A precursor.
     
 0.572
xynB_1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.571
CDQ19629.1
Membrane protein involved in cytochrome C biogenesis.
  
     0.546
CDQ18081.1
Hypothetical protein.
  
     0.533
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.