STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CDQ21059.1Putative protein containing SIS (Sugar ISomerase) phosphosugar binding domain protein. (237 aa)    
Predicted Functional Partners:
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
     0.843
yvoA_2
HTH-type transcriptional repressor YvoA.
 
     0.818
nagB
Glucosamine-6-phosphate deaminase 1.
       0.812
ptsG_2
EIICBA-Glc.
       0.689
ulaB
Ascorbate-specific phosphotransferase enzyme IIB component.
 
     0.641
mtlR_1
Mannitol operon transcriptional activator.
 
     0.565
ulaA
Ascorbate-specific PTS system EIIC component.
 
     0.557
CDQ21058.1
Beta/alpha-amylase precursor.
       0.503
CDQ20446.1
Bifunctional RNase H/acid phosphatase.
  
     0.481
licR
Putative licABCH operon regulator.
 
     0.451
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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