STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nagAN-acetylglucosamine-6-phosphate deacetylase. (391 aa)    
Predicted Functional Partners:
nagB
Glucosamine-6-phosphate deaminase 1.
 0.999
murQ
N-acetylmuramic acid 6-phosphate etherase.
  
 0.997
ptsG_2
EIICBA-Glc.
 
  
 0.981
ptsG_1
EIICBA-Glc.
 
  
 0.974
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.950
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
 0.945
crr_2
Glucose-specific phosphotransferase enzyme IIA component.
 
  
 0.942
yvoA_2
HTH-type transcriptional repressor YvoA.
 
  
 0.904
CDQ19148.1
BadF/BadG/BcrA/BcrD ATPase family protein.
 
 
 0.859
crr_1
Glucose-specific phosphotransferase enzyme IIA component.
 
  
 0.852
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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