STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDQ21065.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
CDQ21122.1
Hypothetical protein.
  
     0.739
hmoB
Heme-degrading monooxygenase HmoB.
  
     0.709
CDQ19235.1
Hypothetical protein.
  
     0.707
CDQ18334.1
Hypothetical protein; Belongs to the UPF0354 family.
  
     0.699
CDQ20360.1
Hypothetical protein.
  
     0.681
spo0B
Sporulation initiation phosphotransferase B.
  
     0.680
CDQ19864.1
Hypothetical protein.
  
     0.678
CDQ18292.1
Hypothetical protein.
  
     0.675
CDQ21113.1
Hypothetical protein.
  
     0.665
CDQ18201.1
Hypothetical protein.
  
     0.664
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.