STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
comKCompetence protein K. (123 aa)    
Predicted Functional Partners:
CDQ21082.1
Genetic competence transcription factor.
       0.773
CDQ18334.1
Hypothetical protein; Belongs to the UPF0354 family.
  
     0.748
CDQ18201.1
Hypothetical protein.
  
     0.722
fliJ
Chemotaxis CheF protein.
  
     0.717
yycI
Two-component system YycFG regulatory protein.
  
     0.703
CDQ21031.1
Hypothetical protein.
  
     0.667
ytkD_2
Putative 8-oxo-dGTP diphosphatase YtkD; Belongs to the Nudix hydrolase family.
  
     0.667
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.666
ywiB
Putative beta-barrel protein YwiB.
  
     0.665
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.665
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.