STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecsA_2ABC-type transporter ATP-binding protein EcsA. (247 aa)    
Predicted Functional Partners:
CDQ21103.1
Putative ABC-type exoprotein transport system, permease component.
 
  
 0.930
malK
Maltose/maltodextrin import ATP-binding protein MalK.
 
  
 
0.927
ytrE
ABC transporter ATP-binding protein YtrE.
 
 
 
0.910
metN_2
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
  
 
0.820
cmpD
Bicarbonate transport ATP-binding protein CmpD.
 
  
 
0.817
CDQ18509.1
Lantibiotic protection ABC transporter permease subunit, MutG family.
  
  0.694
CDQ21477.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
  0.694
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA.
 
  
 
0.689
CDQ21105.1
HIT-like protein.
 
     0.673
gbuA
Glycine betaine/carnitine transport ATP-binding protein GbuA.
 
    
0.668
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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