Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ecsA_2ABC-type transporter ATP-binding protein EcsA. (247 aa)    
Predicted Functional Partners:
CDQ21103.1
Putative ABC-type exoprotein transport system, permease component.
 
  
 0.949
malK
Maltose/maltodextrin import ATP-binding protein MalK.
 
  
 
0.929
ytrE
ABC transporter ATP-binding protein YtrE.
 
 
 
0.912
metN_2
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
  
 
0.821
cmpD
Bicarbonate transport ATP-binding protein CmpD.
 
  
 
0.818
CDQ21105.1
HIT-like protein.
 
  
 0.720
CDQ21102.1
EcsC protein family protein.
   
 
 0.696
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA.
 
  
 
0.695
gbuA
Glycine betaine/carnitine transport ATP-binding protein GbuA.
 
    
0.668
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
  
 
0.638
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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