STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ21105.1HIT-like protein. (142 aa)    
Predicted Functional Partners:
ecsA_2
ABC-type transporter ATP-binding protein EcsA.
 
     0.673
CDQ21103.1
Putative ABC-type exoprotein transport system, permease component.
     
 0.597
CDQ18542.1
Putative NUDIX hydrolase.
  
 0.573
CDQ21107.1
Gas vesicle protein.
  
    0.556
trpP
Putative tryptophan transport protein.
       0.531
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
 
 
  0.505
CDQ19884.1
Hypothetical protein.
   
  0.486
flgK
Flagellar hook-associated protein 1.
    
   0.457
fliM
Flagellar motor switch protein FliM.
    
   0.457
fliG
Flagellar motor switch protein FliG.
    
   0.457
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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