STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ21111.1Putative transcriptional regulator. (173 aa)    
Predicted Functional Partners:
CDQ20597.1
Hypothetical protein.
  
     0.723
CDQ18016.1
Hypothetical protein; NfeD-like C-terminal, partner-binding.
  
     0.631
cvfC_1
Hypothetical protein; Conserved virulence factor C.
  
     0.625
gbuC_2
Glycine betaine/carnitine transport binding protein GbuC precursor.
 
     0.590
CDQ18386.1
Hypothetical protein.
  
     0.577
CDQ21514.1
Glutaredoxin-like protein, YruB-family.
  
     0.557
gbuA
Glycine betaine/carnitine transport ATP-binding protein GbuA.
 
     0.554
CDQ20476.1
Flagellin N-methylase.
  
     0.541
CDQ18201.1
Hypothetical protein.
  
     0.538
gbuB
Glycine betaine/carnitine transport permease protein GbuB.
 
     0.531
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.