STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ21150.1Putative acetyltransferase YhhY. (168 aa)    
Predicted Functional Partners:
CDQ20526.1
Putative acetyltransferase YhhY.
  
 
  0.674
CDQ20039.1
Ribosomal-protein-alanine acetyltransferase.
  
  
  0.625
CDQ20256.1
Ribosomal-protein-alanine acetyltransferase.
  
  
  0.614
CDQ20058.1
Putative acetyltransferase.
  
 
 0.612
ecsA_3
ABC-type transporter ATP-binding protein EcsA.
       0.581
CDQ21152.1
Hypothetical protein.
       0.581
maa
Maltose O-acetyltransferase.
       0.549
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
 
      0.542
gcp_2
t(6)A37 threonylcarbamoyladenosine biosynthesis protein.
  
 0.479
aroK
Shikimate kinase.
    
  0.445
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.