STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ21252.1Fluoroquinolones export ATP-binding proteinc/MT2762. (352 aa)    
Predicted Functional Partners:
CDQ21254.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.886
ypdA_2
Sensor histidine kinase YpdA.
  
 0.755
CDQ21253.1
Fluoroquinolones export ATP-binding proteinc/MT2762.
 
    
0.618
ypdA_1
Sensor histidine kinase YpdA.
  
 
 0.511
CDQ21275.1
Putative sensor-like histidine kinase.
  
 
 0.511
yxlF
Putative ABC transporter ATP-binding protein YxlF.
 
     0.484
skfE
SkfA peptide export ATP-binding protein SkfE.
  
     0.482
CDQ21251.1
Hypothetical protein.
       0.476
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.461
CDQ20281.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
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