STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ21703.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
CDQ21702.1
Hypothetical protein.
       0.800
CDQ21704.1
Hypothetical protein.
       0.800
CDQ21701.1
Hypothetical protein.
       0.773
CDQ21705.1
Hypothetical protein.
       0.737
CDQ21706.1
Phage major tail protein, TP901-1 family.
       0.708
CDQ21700.1
Hypothetical protein.
       0.590
CDQ21707.1
Hypothetical protein.
       0.556
CDQ21708.1
Hypothetical protein.
       0.413
Your Current Organism:
Halobacillus dabanensis
NCBI taxonomy Id: 240302
Other names: CGMCC 1.3704, H. dabanensis, Halobacillus dabanensis Liu et al. 2005, Halobacillus sp. D-8, JCM 12772, strain D-8
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.