STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN84772.1Putative sporulation protein YyaC. (208 aa)    
Predicted Functional Partners:
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.793
SDO46051.1
Stage III sporulation protein AD.
  
     0.755
SDO46090.1
Stage III sporulation protein AE.
  
     0.750
SDP06784.1
Sporulation integral membrane protein YlbJ.
  
    0.741
SDP67527.1
AbrB family transcriptional regulator, stage V sporulation protein T.
  
  
 0.690
SDO61916.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
     0.675
SDN84738.1
Uncharacterized membrane protein YkvI.
 
    0.668
SDP47236.1
Spore germination protein.
  
     0.667
SDP47201.1
Spore germination protein AA/spore germination protein.
  
     0.629
SDO46816.1
Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
     0.619
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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