STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN85461.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
SDN85419.1
Protein of unknown function.
     0.929
SDO06518.1
Protein of unknown function.
     0.775
SDO34171.1
Protein of unknown function.
     0.775
SDO69153.1
Protein of unknown function.
     0.775
SDP63874.1
Protein of unknown function.
     0.775
SDP63923.1
Protein of unknown function.
     0.775
SDO01139.1
Protein of unknown function.
     0.773
SDO28469.1
Protein of unknown function.
     0.773
SDN85388.1
Hypothetical protein.
       0.700
SDP23947.1
Hypothetical protein.
  
     0.594
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.