STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO22251.1Protein of unknown function. (145 aa)    
Predicted Functional Partners:
SDP78740.1
YtkA-like.
  
     0.634
SDP12830.1
Protein of unknown function.
  
     0.590
SDN76692.1
Hypothetical protein.
  
     0.530
SDO18098.1
Hypothetical protein.
  
     0.522
SDO92624.1
Protein of unknown function.
  
     0.522
SDO22293.1
Arginine deiminase.
       0.517
SDP79942.1
Uncharacterized beta-barrel protein YwiB, DUF1934 family.
  
     0.514
SDO56976.1
Accessory Sec system S-layer assembly protein.
  
     0.500
SDO45700.1
Hypothetical protein.
  
     0.486
SDN87599.1
Inhibitor of the pro-sigma K processing machinery.
  
     0.484
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.