STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO34539.1PadR family transcriptional regulator, regulatory protein PadR. (126 aa)    
Predicted Functional Partners:
SDO34584.1
Uncharacterized membrane-anchored protein.
 
    0.855
SDP46785.1
DNA-binding ferritin-like protein (Dps family).
 
  
 0.654
SDO73692.1
Uncharacterized membrane protein.
 
    0.495
SDO34500.1
Iron/zinc/copper transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.472
SDO34417.1
Iron/zinc/copper transport system ATP-binding protein.
       0.406
SDO34459.1
Iron/zinc/copper transport system permease protein.
       0.406
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.