STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO73332.1Hypothetical protein. (452 aa)    
Predicted Functional Partners:
SDO73296.1
Sucrose-6-phosphate hydrolase SacC, GH32 family.
 
     0.636
SDO73436.1
Multiple sugar transport system substrate-binding protein.
 
     0.570
SDO73264.1
Uncharacterized membrane protein YesL.
 
     0.521
SDO00362.1
PLD-like domain-containing protein.
  
     0.453
SDO73470.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
    0.447
SDN96487.1
ABC-2 type transport system permease protein.
  
     0.434
SDO69779.1
Zinc carboxypeptidase.
  
     0.421
SDO72535.1
Hypothetical protein.
  
    0.412
SDN96439.1
ABC-2 type transport system ATP-binding protein.
  
     0.408
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.