Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO36390.1 | SDO94609.1 | SAMN05421677_104224 | SAMN05421677_109140 | Spore germination protein KA. | Stage IV sporulation protein A. | 0.770 |
SDO36390.1 | SDO98783.1 | SAMN05421677_104224 | SAMN05421677_11035 | Spore germination protein KA. | Uncharacterized membrane protein YcaP, DUF421 family. | 0.507 |
SDO36390.1 | SDP07846.1 | SAMN05421677_104224 | SAMN05421677_111109 | Spore germination protein KA. | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.772 |
SDO36390.1 | SDP28287.1 | SAMN05421677_104224 | SAMN05421677_11531 | Spore germination protein KA. | Uncharacterized membrane protein YcaP, DUF421 family. | 0.540 |
SDO36390.1 | SDP45688.1 | SAMN05421677_104224 | SAMN05421677_11942 | Spore germination protein KA. | Stage V sporulation protein AE. | 0.771 |
SDO36390.1 | SDP45721.1 | SAMN05421677_104224 | SAMN05421677_11943 | Spore germination protein KA. | Stage V sporulation protein AD. | 0.777 |
SDO36390.1 | SDP45748.1 | SAMN05421677_104224 | SAMN05421677_11944 | Spore germination protein KA. | Stage V sporulation protein AC. | 0.776 |
SDO36390.1 | SDP50329.1 | SAMN05421677_104224 | SAMN05421677_12051 | Spore germination protein KA. | Sporulation protein YunB. | 0.552 |
SDO94609.1 | SDO36390.1 | SAMN05421677_109140 | SAMN05421677_104224 | Stage IV sporulation protein A. | Spore germination protein KA. | 0.770 |
SDO94609.1 | SDO98783.1 | SAMN05421677_109140 | SAMN05421677_11035 | Stage IV sporulation protein A. | Uncharacterized membrane protein YcaP, DUF421 family. | 0.539 |
SDO94609.1 | SDP07846.1 | SAMN05421677_109140 | SAMN05421677_111109 | Stage IV sporulation protein A. | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.774 |
SDO94609.1 | SDP45688.1 | SAMN05421677_109140 | SAMN05421677_11942 | Stage IV sporulation protein A. | Stage V sporulation protein AE. | 0.774 |
SDO94609.1 | SDP45721.1 | SAMN05421677_109140 | SAMN05421677_11943 | Stage IV sporulation protein A. | Stage V sporulation protein AD. | 0.787 |
SDO94609.1 | SDP45748.1 | SAMN05421677_109140 | SAMN05421677_11944 | Stage IV sporulation protein A. | Stage V sporulation protein AC. | 0.801 |
SDO94609.1 | SDP50329.1 | SAMN05421677_109140 | SAMN05421677_12051 | Stage IV sporulation protein A. | Sporulation protein YunB. | 0.688 |
SDO98783.1 | SDO36390.1 | SAMN05421677_11035 | SAMN05421677_104224 | Uncharacterized membrane protein YcaP, DUF421 family. | Spore germination protein KA. | 0.507 |
SDO98783.1 | SDO94609.1 | SAMN05421677_11035 | SAMN05421677_109140 | Uncharacterized membrane protein YcaP, DUF421 family. | Stage IV sporulation protein A. | 0.539 |
SDO98783.1 | SDO98827.1 | SAMN05421677_11035 | SAMN05421677_11036 | Uncharacterized membrane protein YcaP, DUF421 family. | Na+/H+ antiporter NhaD. | 0.731 |
SDO98783.1 | SDO98864.1 | SAMN05421677_11035 | SAMN05421677_11037 | Uncharacterized membrane protein YcaP, DUF421 family. | Putative membrane protein, TIGR04086 family. | 0.559 |
SDO98783.1 | SDP07846.1 | SAMN05421677_11035 | SAMN05421677_111109 | Uncharacterized membrane protein YcaP, DUF421 family. | RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.500 |
page 1 of 4