STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP37289.1Cystathionine gamma-lyase / homocysteine desulfhydrase. (378 aa)    
Predicted Functional Partners:
SDP37318.1
O-acetylserine dependent cystathionine beta-synthase.
 
 0.992
SDP58993.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.962
SDP67156.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.962
luxS
S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
  
 
 0.952
SDP11871.1
Homocysteine S-methyltransferase.
  
 0.949
SDP49480.1
Cystathione beta-lyase.
 
 
 0.942
cysI
Sulfite reductase (NADPH) hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.936
SDP71632.1
Cystathionine gamma-synthase.
  
  
 
0.928
SDO92973.1
Aspartate aminotransferase.
 
 
 
  0.926
SDN81599.1
Branched-chain amino acid aminotransferase.
   
  0.924
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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