STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP41343.1Spore coat protein CotO. (183 aa)    
Predicted Functional Partners:
SDP24774.1
IDEAL domain-containing protein.
  
     0.771
SDP00062.1
Stage II sporulation protein B.
  
    0.766
SDP53214.1
Spore germination protein PE.
  
     0.752
SDO93039.1
Uncharacterized protein YpmB.
  
     0.751
SDO62174.1
TATA-box binding.
  
     0.750
SDP01325.1
Tetratricopeptide repeat-containing protein.
  
     0.748
SDP41375.1
Spore coat protein Z.
  
     0.742
SDP65618.1
Hypothetical protein.
  
     0.739
SDO99279.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
  
     0.732
SDP55266.1
Protein of unknown function.
  
     0.731
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.