STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP52603.1Heme-degrading monooxygenase HmoA. (168 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
  
  0.717
SDP53461.1
Protein of unknown function.
  
     0.621
SDP25290.1
YhzD-like protein.
  
     0.620
SDP52627.1
Penicillin-binding protein 2A.
       0.560
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
     0.533
SDP27194.1
Hypothetical protein.
   
    0.526
SDP27232.1
Uncharacterized protein YdaT.
   
    0.526
SDP52698.1
Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
     0.510
SDP41645.1
Enterochelin esterase.
  
   
 0.505
SDO94687.1
Protein of unknown function.
  
     0.498
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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