Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDP51117.1 | SDP52462.1 | SAMN05421677_12082 | SAMN05421677_12116 | Heme-degrading monooxygenase HmoA. | Bacterioferritin. | 0.742 |
SDP51117.1 | SDP79657.1 | SAMN05421677_12082 | SAMN05421677_1397 | Heme-degrading monooxygenase HmoA. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.748 |
SDP51117.1 | hemH | SAMN05421677_12082 | SAMN05421677_12125 | Heme-degrading monooxygenase HmoA. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.750 |
SDP52462.1 | SDP51117.1 | SAMN05421677_12116 | SAMN05421677_12082 | Bacterioferritin. | Heme-degrading monooxygenase HmoA. | 0.742 |
SDP52462.1 | SDP52603.1 | SAMN05421677_12116 | SAMN05421677_12122 | Bacterioferritin. | Heme-degrading monooxygenase HmoA. | 0.413 |
SDP52462.1 | hemH | SAMN05421677_12116 | SAMN05421677_12125 | Bacterioferritin. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.942 |
SDP52603.1 | SDP52462.1 | SAMN05421677_12122 | SAMN05421677_12116 | Heme-degrading monooxygenase HmoA. | Bacterioferritin. | 0.413 |
SDP52603.1 | SDP52698.1 | SAMN05421677_12122 | SAMN05421677_12126 | Heme-degrading monooxygenase HmoA. | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.510 |
SDP52603.1 | SDP79657.1 | SAMN05421677_12122 | SAMN05421677_1397 | Heme-degrading monooxygenase HmoA. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.459 |
SDP52603.1 | hemE | SAMN05421677_12122 | SAMN05421677_12124 | Heme-degrading monooxygenase HmoA. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.533 |
SDP52603.1 | hemH | SAMN05421677_12122 | SAMN05421677_12125 | Heme-degrading monooxygenase HmoA. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.717 |
SDP52698.1 | SDP52603.1 | SAMN05421677_12126 | SAMN05421677_12122 | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Heme-degrading monooxygenase HmoA. | 0.510 |
SDP52698.1 | SDP79657.1 | SAMN05421677_12126 | SAMN05421677_1397 | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.892 |
SDP52698.1 | hemC | SAMN05421677_12126 | SAMN05421677_11093 | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.583 |
SDP52698.1 | hemE | SAMN05421677_12126 | SAMN05421677_12124 | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.998 |
SDP52698.1 | hemH | SAMN05421677_12126 | SAMN05421677_12125 | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.999 |
SDP79657.1 | SDP51117.1 | SAMN05421677_1397 | SAMN05421677_12082 | Chlorite dismutase; May function as heme-dependent peroxidase. | Heme-degrading monooxygenase HmoA. | 0.748 |
SDP79657.1 | SDP52603.1 | SAMN05421677_1397 | SAMN05421677_12122 | Chlorite dismutase; May function as heme-dependent peroxidase. | Heme-degrading monooxygenase HmoA. | 0.459 |
SDP79657.1 | SDP52698.1 | SAMN05421677_1397 | SAMN05421677_12126 | Chlorite dismutase; May function as heme-dependent peroxidase. | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.892 |
SDP79657.1 | ctaA | SAMN05421677_1397 | SAMN05421677_11157 | Chlorite dismutase; May function as heme-dependent peroxidase. | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. | 0.564 |
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