STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP52323.1Gas vesicle protein. (135 aa)    
Predicted Functional Partners:
SDP53032.1
Hypothetical protein.
  
     0.749
SDP24774.1
IDEAL domain-containing protein.
  
     0.746
SDP52400.1
ABC-2 type transport system permease protein.
 
     0.738
SDO58637.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.730
SDP01325.1
Tetratricopeptide repeat-containing protein.
  
    0.723
SDP67388.1
Cell division protein DivIC.
 
     0.716
SDN74876.1
Uncharacterized protein YoxC, contains an MCP-like domain.
 
    0.707
SDP41375.1
Spore coat protein Z.
  
     0.695
SDP41343.1
Spore coat protein CotO.
  
     0.657
SDO33683.1
Spore coat protein Z.
  
     0.641
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.