STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP74459.1Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.740
SDP79942.1
Uncharacterized beta-barrel protein YwiB, DUF1934 family.
  
     0.686
SDN74804.1
Nicotinate phosphoribosyltransferase; Belongs to the NAPRTase family.
  
 
  0.633
SDP53006.1
Competence protein ComK.
  
   
 0.624
SDO84110.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.613
SDP51145.1
Hypothetical protein.
  
     0.613
SDO18793.1
Negative regulator of flagellin synthesis FlgM.
  
     0.606
SDN76692.1
Hypothetical protein.
  
     0.589
SDO05645.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.558
SDO32171.1
Poly-gamma-glutamate synthase PgsB/CapB.
  
  
  0.549
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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