STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP79546.1Transposase and inactivated derivatives. (84 aa)    
Predicted Functional Partners:
SDO61716.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.577
SDP30227.1
Hypothetical protein.
  
     0.556
SDO73264.1
Uncharacterized membrane protein YesL.
  
     0.489
SDP33133.1
Transglutaminase-like enzyme, putative cysteine protease.
  
     0.453
SDP78009.1
Spore germination protein KB.
  
     0.442
SDP57916.1
Fucose permease.
  
     0.423
SDO29915.1
SEC-C motif-containing protein.
  
     0.409
SDP78045.1
Spore germination protein KC.
  
     0.402
Your Current Organism:
Halobacillus aidingensis
NCBI taxonomy Id: 240303
Other names: CGMCC 1.3703, H. aidingensis, Halobacillus aidingensis Liu et al. 2005, Halobacillus sp. AD-6, JCM 12771, strain AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.