STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANZ62796.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (249 aa)    
Predicted Functional Partners:
ANZ62795.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.971
ANZ64932.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.587
ANZ63815.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.513
ANZ62766.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.478
ANZ64691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.478
ANZ65504.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.478
ANZ63114.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
ANZ62788.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.429
ANZ64066.1
Ribonucleotide-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
   
    0.424
Your Current Organism:
Lactobacillus paracollinoides
NCBI taxonomy Id: 240427
Other names: DSM 15502, JCM 11969, L. paracollinoides, Lactobacillus paracollinoides Suzuki et al. 2004, Lactobacillus pastorianus, Lactobacillus sp. DSM 20197, strain LA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.