Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANZ63562.1 | ANZ64182.1 | AYR62_05285 | AYR62_08920 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.727 |
ANZ63562.1 | AYR62_12750 | AYR62_05285 | AYR62_12750 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA topoisomerase I; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
ANZ64182.1 | ANZ63562.1 | AYR62_08920 | AYR62_05285 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.727 |
ANZ64182.1 | ANZ64750.1 | AYR62_08920 | AYR62_12120 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.918 |
ANZ64182.1 | AYR62_12750 | AYR62_08920 | AYR62_12750 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.531 |
ANZ64182.1 | murB | AYR62_08920 | AYR62_03520 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.684 |
ANZ64750.1 | ANZ64182.1 | AYR62_12120 | AYR62_08920 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.918 |
AYR62_12750 | ANZ63562.1 | AYR62_12750 | AYR62_05285 | DNA topoisomerase I; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.773 |
AYR62_12750 | ANZ64182.1 | AYR62_12750 | AYR62_08920 | DNA topoisomerase I; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.531 |
murB | ANZ64182.1 | AYR62_03520 | AYR62_08920 | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |