node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB40630.1 | SKB47405.1 | SAMN05660776_1023 | SAMN05660776_1254 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Histidine triad (HIT) family protein. | 0.495 |
SKB40630.1 | greA | SAMN05660776_1023 | SAMN05660776_1255 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.792 |
SKB40630.1 | infB | SAMN05660776_1023 | SAMN05660776_1236 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.400 |
SKB40630.1 | rpoA | SAMN05660776_1023 | SAMN05660776_3017 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
SKB40630.1 | rpoB | SAMN05660776_1023 | SAMN05660776_2085 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
SKB40630.1 | rpoC | SAMN05660776_1023 | SAMN05660776_2086 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
SKB40630.1 | rpsO | SAMN05660776_1023 | SAMN05660776_2731 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.875 |
SKB47394.1 | SKB47405.1 | SAMN05660776_1253 | SAMN05660776_1254 | acyl-CoA thioester hydrolase. | Histidine triad (HIT) family protein. | 0.786 |
SKB47394.1 | greA | SAMN05660776_1253 | SAMN05660776_1255 | acyl-CoA thioester hydrolase. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.522 |
SKB47405.1 | SKB40630.1 | SAMN05660776_1254 | SAMN05660776_1023 | Histidine triad (HIT) family protein. | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.495 |
SKB47405.1 | SKB47394.1 | SAMN05660776_1254 | SAMN05660776_1253 | Histidine triad (HIT) family protein. | acyl-CoA thioester hydrolase. | 0.786 |
SKB47405.1 | SKB47427.1 | SAMN05660776_1254 | SAMN05660776_1256 | Histidine triad (HIT) family protein. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.430 |
SKB47405.1 | greA | SAMN05660776_1254 | SAMN05660776_1255 | Histidine triad (HIT) family protein. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.666 |
SKB47405.1 | rpoB | SAMN05660776_1254 | SAMN05660776_2085 | Histidine triad (HIT) family protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.486 |
SKB47405.1 | rpoC | SAMN05660776_1254 | SAMN05660776_2086 | Histidine triad (HIT) family protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.546 |
SKB47427.1 | SKB47405.1 | SAMN05660776_1256 | SAMN05660776_1254 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Histidine triad (HIT) family protein. | 0.430 |
SKB47427.1 | greA | SAMN05660776_1256 | SAMN05660776_1255 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.589 |
SKB47794.1 | greA | SAMN05660776_1280 | SAMN05660776_1255 | Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.492 |
greA | SKB40630.1 | SAMN05660776_1255 | SAMN05660776_1023 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.792 |
greA | SKB47394.1 | SAMN05660776_1255 | SAMN05660776_1253 | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | acyl-CoA thioester hydrolase. | 0.522 |