Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB33778.1 | SKB49970.1 | SAMN05660776_0517 | SAMN05660776_1431 | Acyl-CoA reductase (LuxC). | Hypothetical protein. | 0.730 |
SKB33778.1 | SKB54480.1 | SAMN05660776_0517 | SAMN05660776_1806 | Acyl-CoA reductase (LuxC). | uroporphyrinogen-III synthase. | 0.668 |
SKB33778.1 | SKB62836.1 | SAMN05660776_0517 | SAMN05660776_2225 | Acyl-CoA reductase (LuxC). | Protein of unknown function. | 0.688 |
SKB33778.1 | SKB84936.1 | SAMN05660776_0517 | SAMN05660776_0086 | Acyl-CoA reductase (LuxC). | GH3 auxin-responsive promoter. | 0.698 |
SKB34008.1 | SKB35995.1 | SAMN05660776_0543 | SAMN05660776_0698 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.746 |
SKB34008.1 | SKB49970.1 | SAMN05660776_0543 | SAMN05660776_1431 | Protein of unknown function. | Hypothetical protein. | 0.567 |
SKB34008.1 | SKB52051.1 | SAMN05660776_0543 | SAMN05660776_1594 | Protein of unknown function. | Uncharacterized metal-binding protein YceD, DUF177 family. | 0.759 |
SKB34008.1 | SKB54480.1 | SAMN05660776_0543 | SAMN05660776_1806 | Protein of unknown function. | uroporphyrinogen-III synthase. | 0.747 |
SKB34008.1 | SKB62836.1 | SAMN05660776_0543 | SAMN05660776_2225 | Protein of unknown function. | Protein of unknown function. | 0.746 |
SKB34008.1 | SKB82455.1 | SAMN05660776_0543 | SAMN05660776_3180 | Protein of unknown function. | Cell division protein ZapA. | 0.478 |
SKB34008.1 | SKB84936.1 | SAMN05660776_0543 | SAMN05660776_0086 | Protein of unknown function. | GH3 auxin-responsive promoter. | 0.685 |
SKB34008.1 | SKB86120.1 | SAMN05660776_0543 | SAMN05660776_0143 | Protein of unknown function. | Outer membrane lipoprotein-sorting protein. | 0.664 |
SKB35995.1 | SKB34008.1 | SAMN05660776_0698 | SAMN05660776_0543 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.746 |
SKB35995.1 | SKB52051.1 | SAMN05660776_0698 | SAMN05660776_1594 | Tetratricopeptide repeat-containing protein. | Uncharacterized metal-binding protein YceD, DUF177 family. | 0.767 |
SKB35995.1 | SKB54480.1 | SAMN05660776_0698 | SAMN05660776_1806 | Tetratricopeptide repeat-containing protein. | uroporphyrinogen-III synthase. | 0.506 |
SKB35995.1 | SKB62836.1 | SAMN05660776_0698 | SAMN05660776_2225 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.580 |
SKB35995.1 | SKB84936.1 | SAMN05660776_0698 | SAMN05660776_0086 | Tetratricopeptide repeat-containing protein. | GH3 auxin-responsive promoter. | 0.473 |
SKB35995.1 | SKB86120.1 | SAMN05660776_0698 | SAMN05660776_0143 | Tetratricopeptide repeat-containing protein. | Outer membrane lipoprotein-sorting protein. | 0.698 |
SKB49970.1 | SKB33778.1 | SAMN05660776_1431 | SAMN05660776_0517 | Hypothetical protein. | Acyl-CoA reductase (LuxC). | 0.730 |
SKB49970.1 | SKB34008.1 | SAMN05660776_1431 | SAMN05660776_0543 | Hypothetical protein. | Protein of unknown function. | 0.567 |
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