Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMW98307.1 | AMW98312.1 | ATY39_02030 | ATY39_02055 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| AMW98307.1 | AMW98950.1 | ATY39_02030 | ATY39_05455 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
| AMW98307.1 | AMW99829.1 | ATY39_02030 | ATY39_10485 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.515 |
| AMW98307.1 | ctaA | ATY39_02030 | ATY39_02025 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. | 0.889 |
| AMW98307.1 | ctaB | ATY39_02030 | ATY39_05250 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.967 |
| AMW98307.1 | ctaF | ATY39_02030 | ATY39_02045 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome B6; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMW98307.1 | ctaG | ATY39_02030 | ATY39_02050 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase assembly factor CtaG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
| AMW98307.1 | qcrC | ATY39_02030 | ATY39_03855 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMW98307.1 | ylbA | ATY39_02030 | ATY39_02065 | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| AMW98312.1 | AMW98307.1 | ATY39_02055 | ATY39_02030 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.571 |
| AMW98312.1 | AMW98950.1 | ATY39_02055 | ATY39_05455 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.724 |
| AMW98312.1 | ctaA | ATY39_02055 | ATY39_02025 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. | 0.712 |
| AMW98312.1 | ctaF | ATY39_02055 | ATY39_02045 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B6; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.660 |
| AMW98312.1 | ctaG | ATY39_02055 | ATY39_02050 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c oxidase assembly factor CtaG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.842 |
| AMW98950.1 | AMW98307.1 | ATY39_05455 | ATY39_02030 | Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.926 |
| AMW98950.1 | AMW98312.1 | ATY39_05455 | ATY39_02055 | Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.724 |
| AMW98950.1 | AMW99829.1 | ATY39_05455 | ATY39_10485 | Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.625 |
| AMW98950.1 | AMX01055.1 | ATY39_05455 | ATY39_09115 | Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
| AMW98950.1 | ctaA | ATY39_05455 | ATY39_02025 | Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. | 0.823 |
| AMW98950.1 | ctaB | ATY39_05455 | ATY39_05250 | Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.512 |
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