Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMW99912.1 | azoR3 | ATY39_11050 | ATY39_12750 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.449 |
AMX00201.1 | AMX01109.1 | ATY39_12760 | ATY39_12755 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.585 |
AMX00201.1 | azoR3 | ATY39_12760 | ATY39_12750 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.405 |
AMX01109.1 | AMX00201.1 | ATY39_12755 | ATY39_12760 | Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.585 |
AMX01109.1 | azoR3 | ATY39_12755 | ATY39_12750 | Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.537 |
azoR3 | AMW99912.1 | ATY39_12750 | ATY39_11050 | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
azoR3 | AMX00201.1 | ATY39_12750 | ATY39_12760 | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.405 |
azoR3 | AMX01109.1 | ATY39_12750 | ATY39_12755 | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |