STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAI1Retinoic acid induced 1. (1908 aa)    
Predicted Functional Partners:
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.835
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.828
KDM2A
Lysine demethylase 2A.
   
 0.801
KDM2B
Lysine demethylase 2B.
   
 0.801
ENSACOP00000009856
annotation not available
  
 0.777
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.775
EED
Embryonic ectoderm development.
   
 0.772
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.772
ENSACOP00000000757
annotation not available
   
 0.770
ENSACOP00000013004
annotation not available
   
 0.770
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.