STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACOP00000001774annotation not available (224 aa)    
Predicted Functional Partners:
SOD1
Superoxide dismutase 1.
  
 0.992
SOD3
Superoxide dismutase 3.
  
 0.989
GPX8
Glutathione peroxidase 8 (putative).
  
 0.981
GPX1
Glutathione peroxidase 1.
   
 0.980
GPX7
Glutathione peroxidase 7.
  
 0.972
ENSACOP00000013045
annotation not available
  
 0.969
ENSACOP00000015541
annotation not available
  
 0.969
SIRT3
Sirtuin 3.
    
 0.965
ENSACOP00000018412
annotation not available
  
 
 0.965
CAT
Catalase.
  
 0.963
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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