Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLD1Phospholipase D1. (1068 aa)    
Predicted Functional Partners:
ARF6
ADP ribosylation factor 6.
   
 0.981
PLA2G4A
Phospholipase A2 group IVA.
   
 
 0.945
LCAT
Lecithin-cholesterol acyltransferase.
     
 0.938
MBOAT2
Membrane bound O-acyltransferase domain containing 2.
    
 0.938
DGKQ
Diacylglycerol kinase theta.
     
 0.938
ENSACOP00000001493
annotation not available
   
 0.935
RALA
RAS like proto-oncogene A.
   
 0.935
ENSACOP00000016789
annotation not available
   
 0.935
DGKE
Diacylglycerol kinase epsilon.
     
 0.934
PLPP2
Phospholipid phosphatase 2.
   
 0.932
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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