STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOOK3Hook microtubule tethering protein 3. (703 aa)    
Predicted Functional Partners:
AKTIP
AKT interacting protein.
    
 0.991
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.951
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
    
  0.942
VPS41
VPS41 subunit of HOPS complex.
    
 0.942
ENSACOP00000004297
annotation not available
   
  0.941
FAM160A1
Family with sequence similarity 160 member A1.
    
 0.931
FAM160A2
Family with sequence similarity 160 member A2.
    
 0.931
VPS39
VPS39 subunit of HOPS complex.
    
  0.925
HOOK1
Hook microtubule tethering protein 1.
  
  
 
0.892
ENSACOP00000004036
annotation not available
    
 0.708
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.