STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX3PBX homeobox 3. (439 aa)    
Predicted Functional Partners:
HOXB5
Homeobox B5.
    
 0.876
PKNOX1
PBX/knotted 1 homeobox 1.
    
0.850
MEIS2
Meis homeobox 2.
   
0.838
MEIS1
Meis homeobox 1.
   
0.838
HOXB1
Homeobox B1.
    
 0.832
HOXB6
Homeobox B6.
    
 0.788
HOXB7
Homeobox B7.
    
 0.757
HOXA1
Homeobox A1.
    
 0.748
PKNOX2
PBX/knotted 1 homeobox 2.
    
0.748
HOXB8
Homeobox B8.
    
 0.732
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.