Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAPK11Mitogen-activated protein kinase 11. (351 aa)    
Predicted Functional Partners:
MAPKAPK2
MAPK activated protein kinase 2.
   
 0.991
PTPRR
Protein tyrosine phosphatase receptor type R.
    
 0.985
MAPKAPK3
MAPK activated protein kinase 3.
   
 0.985
DUSP10
Dual specificity phosphatase 10.
   
 0.980
MEF2C
Myocyte enhancer factor 2C.
    
 0.977
ATF2
Activating transcription factor 2.
    
 0.977
ENSACOP00000013660
annotation not available
    
 0.977
RPS6KA5
Ribosomal protein S6 kinase A5.
   
  0.977
PTPN7
Protein tyrosine phosphatase non-receptor type 7.
    
 0.976
MAP2K3
Mitogen-activated protein kinase kinase 3.
   
 0.974
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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