STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACOP00000007071annotation not available (160 aa)    
Predicted Functional Partners:
LDB2
LIM domain binding 2.
    
 0.628
LDB1
LIM domain binding 1.
    
 0.628
SRF
Serum response factor.
    
 0.589
SCX
Scleraxis bHLH transcription factor.
  
 
 0.536
TCF3
Transcription factor 3.
    
  0.535
ENSACOP00000020427
annotation not available
    
  0.535
TCF12
Transcription factor 12.
    
  0.535
ASCL2
Achaete-scute family bHLH transcription factor 2.
    
 0.525
NHLH2
Nescient helix-loop-helix 2.
   
 0.518
NHLH1
Nescient helix-loop-helix 1.
   
 0.518
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.