STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM110AFamily with sequence similarity 110 member A. (201 aa)    
Predicted Functional Partners:
ENSACOP00000024360
annotation not available
      
 0.555
ZMAT4
Zinc finger matrin-type 4.
      
 0.516
ENSACOP00000000064
annotation not available
      
 0.420
LMAN1
Lectin, mannose binding 1.
      
 0.420
TACC1
Transforming acidic coiled-coil containing protein 1.
      
 0.418
RPAP3
RNA polymerase II associated protein 3.
      
 0.414
KCNK2
Potassium two pore domain channel subfamily K member 2.
      
 0.412
ENSACOP00000025512
annotation not available
      
 0.412
SNX29
Sorting nexin 29.
      
 0.410
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.