STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P3H2Prolyl 3-hydroxylase 2. (697 aa)    
Predicted Functional Partners:
P3H4
Prolyl 3-hydroxylase family member 4 (inactive).
   
0.805
CRTAP
Cartilage associated protein.
   
0.805
PPIC
Peptidylprolyl isomerase C.
   
 0.755
COL6A2
Collagen type VI alpha 2 chain.
   
 0.603
COL17A1
Collagen type XVII alpha 1 chain.
    
 0.583
TICRR
TOPBP1 interacting checkpoint and replication regulator.
   
 0.577
PARD3
Par-3 family cell polarity regulator.
    
  0.560
SERPINH1
Serpin family H member 1.
   
 
 0.543
PARPBP
PARP1 binding protein.
   
  0.513
PDIA2
Protein disulfide isomerase family A member 2.
   
 0.503
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.