STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACOP00000012144annotation not available (210 aa)    
Predicted Functional Partners:
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.952
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.951
SMC6
Structural maintenance of chromosomes 6.
    
 0.934
ENSACOP00000020592
annotation not available
    
 0.932
NSMCE2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.931
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.927
RANBP2
RAN binding protein 2.
   
  0.896
SMC3
Structural maintenance of chromosomes 3.
    
 0.826
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.802
SMC4
Structural maintenance of chromosomes 4.
    
 0.752
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.