Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSACOP00000020427 | LDB1 | ENSACOP00000020427 | ENSACOP00000020727 | annotation not available | LIM domain binding 1. | 0.764 |
ENSACOP00000020427 | LDB2 | ENSACOP00000020427 | ENSACOP00000003096 | annotation not available | LIM domain binding 2. | 0.764 |
ENSACOP00000020427 | SHOX | ENSACOP00000020427 | ENSACOP00000012619 | annotation not available | Short stature homeobox. | 0.535 |
LDB1 | ENSACOP00000020427 | ENSACOP00000020727 | ENSACOP00000020427 | LIM domain binding 1. | annotation not available | 0.764 |
LDB1 | LHX3 | ENSACOP00000020727 | ENSACOP00000011088 | LIM domain binding 1. | LIM homeobox 3. | 0.788 |
LDB1 | LHX4 | ENSACOP00000020727 | ENSACOP00000014436 | LIM domain binding 1. | LIM homeobox 4. | 0.788 |
LDB1 | SHOX | ENSACOP00000020727 | ENSACOP00000012619 | LIM domain binding 1. | Short stature homeobox. | 0.628 |
LDB1 | TCF12 | ENSACOP00000020727 | ENSACOP00000025987 | LIM domain binding 1. | Transcription factor 12. | 0.764 |
LDB1 | TCF3 | ENSACOP00000020727 | ENSACOP00000015079 | LIM domain binding 1. | Transcription factor 3. | 0.764 |
LDB2 | ENSACOP00000020427 | ENSACOP00000003096 | ENSACOP00000020427 | LIM domain binding 2. | annotation not available | 0.764 |
LDB2 | LHX3 | ENSACOP00000003096 | ENSACOP00000011088 | LIM domain binding 2. | LIM homeobox 3. | 0.771 |
LDB2 | LHX4 | ENSACOP00000003096 | ENSACOP00000014436 | LIM domain binding 2. | LIM homeobox 4. | 0.771 |
LDB2 | SHOX | ENSACOP00000003096 | ENSACOP00000012619 | LIM domain binding 2. | Short stature homeobox. | 0.628 |
LDB2 | TCF12 | ENSACOP00000003096 | ENSACOP00000025987 | LIM domain binding 2. | Transcription factor 12. | 0.764 |
LDB2 | TCF3 | ENSACOP00000003096 | ENSACOP00000015079 | LIM domain binding 2. | Transcription factor 3. | 0.764 |
LHX3 | LDB1 | ENSACOP00000011088 | ENSACOP00000020727 | LIM homeobox 3. | LIM domain binding 1. | 0.788 |
LHX3 | LDB2 | ENSACOP00000011088 | ENSACOP00000003096 | LIM homeobox 3. | LIM domain binding 2. | 0.771 |
LHX3 | SHOX | ENSACOP00000011088 | ENSACOP00000012619 | LIM homeobox 3. | Short stature homeobox. | 0.475 |
LHX4 | LDB1 | ENSACOP00000014436 | ENSACOP00000020727 | LIM homeobox 4. | LIM domain binding 1. | 0.788 |
LHX4 | LDB2 | ENSACOP00000014436 | ENSACOP00000003096 | LIM homeobox 4. | LIM domain binding 2. | 0.771 |
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